Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gsph | EC392_04055 | Not Available | Positive | 939931 - 940446 | 19057.8 |
| type ii secretion system protein gspi | EC392_04060 | Not Available | Positive | 940443 - 940829 | 14077.7 |
| type ii secretion system protein gspj | EC392_04065 | Not Available | Positive | 940819 - 941532 | 26281.0 |
| general secretion pathway protein gspk | EC392_04070 | Not Available | Positive | 941547 - 942527 | 36275.7 |
| type ii secretion system protein gspl | EC392_04075 | Not Available | Positive | 942524 - 943726 | 44714.6 |
| type ii secretion system protein m | EC392_04080 | Not Available | Positive | 943723 - 944217 | 19051.4 |
| prepilin peptidase | EC392_04085 | Not Available | Positive | 944252 - 945091 | 30869.8 |
| membrane protein ypdk | EC392_04090 | Not Available | Negative | 945221 - 945295 | 2910.9 |
| ybak/prolyl-trna synthetase associated domain-containing protein | EC392_04095 | Not Available | Positive | 945625 - 946113 | 17710.3 |
| alpha/beta hydrolase | EC392_04100 | Not Available | Positive | 946384 - 946959 | 22009.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
