Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ala-d/l-glu epimerase | EC392_04005 | Not Available | Negative | 928635 - 929615 | 35164.2 |
| duf1611 domain-containing protein | EC392_04010 | Not Available | Negative | 929612 - 930613 | 35465.6 |
| alanine transaminase | EC392_04015 | Not Available | Positive | 931292 - 932527 | 45912.1 |
| lipoprotein, puls/outs family | EC392_04020 | Not Available | Positive | 932635 - 933018 | 13963.7 |
| general secretion pathway protein | EC392_04025 | Not Available | Negative | 933015 - 933506 | 18051.1 |
| type ii secretion system protein gspc | EC392_04030 | Not Available | Positive | 933791 - 934600 | 29771.3 |
| type ii secretion system protein gspd | EC392_04035 | Not Available | Positive | 934620 - 936734 | 75434.3 |
| type ii secretion system protein gspe | EC392_04040 | Not Available | Positive | 936731 - 938230 | 54848.9 |
| type ii secretion system protein gspf | EC392_04045 | Not Available | Positive | 938232 - 939458 | 44545.2 |
| type ii secretion system protein gspg | EC392_04050 | Not Available | Positive | 939488 - 939931 | 16227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
