Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent dna methyltransferase | EC392_03950 | Not Available | Positive | 913500 - 915884 | 90618.7 |
| restriction endonuclease subunit s | EC392_03955 | Not Available | Positive | 915884 - 917305 | 53704.2 |
| type i restriction endonuclease subunit r | EC392_03960 | Not Available | Positive | 917292 - 920291 | 112256.0 |
| hypothetical protein | EC392_03965 | Not Available | Negative | 920503 - 921204 | 26421.3 |
| hypothetical protein | EC392_03970 | Not Available | Negative | 921204 - 921650 | 17221.7 |
| hypothetical protein | EC392_03975 | Not Available | Negative | 921677 - 922744 | 40263.4 |
| duf4102 domain-containing protein | EC392_03985 | Not Available | Negative | 923191 - 924405 | 46333.9 |
| Trna-arg | Not Available | Not Available | Positive | 924600 - 924676 | Not Available |
| mechanosensitive ion channel family protein | EC392_03995 | Not Available | Positive | 925031 - 927487 | 88702.5 |
| d-amino-acid transaminase | EC392_04000 | Not Available | Negative | 927733 - 928593 | 32264.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
