Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4225 domain-containing protein | EC392_03840 | Not Available | Negative | 897881 - 898285 | 15028.8 |
| hypothetical protein | EC392_03845 | Not Available | Negative | 898496 - 898717 | 8581.28 |
| hcp family type vi secretion system effector | EC392_03850 | Not Available | Negative | 898720 - 899199 | 18110.6 |
| duf4942 domain-containing protein | EC392_03855 | Not Available | Negative | 899628 - 900470 | 32306.7 |
| toxin cbta | EC392_03865 | Not Available | Negative | 901149 - 901529 | 13920.4 |
| type iv toxin-antitoxin system yeeu family antitoxin | EC392_03870 | Not Available | Negative | 901555 - 901929 | 14117.9 |
| duf987 domain-containing protein | EC392_03875 | Not Available | Negative | 901950 - 902171 | 8637.58 |
| dna repair protein radc | EC392_03880 | Not Available | Negative | 902181 - 902708 | 19522.5 |
| antirestriction protein | EC392_03885 | Not Available | Negative | 902721 - 903185 | 17620.9 |
| duf905 domain-containing protein | EC392_03890 | Not Available | Negative | 903326 - 903496 | 6605.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
