Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | EC392_03330 | Not Available | Negative | 775209 - 776411 | 42792.9 |
| serine hydroxymethyltransferase | EC392_03335 | Not Available | Positive | 776910 - 778163 | 45184.2 |
| 3-phenylpropionate mfs transporter | EC392_03340 | Not Available | Positive | 778295 - 779464 | 42610.1 |
| abc transporter atp-binding protein | EC392_03345 | Not Available | Negative | 779716 - 780513 | 28840.4 |
| iron abc transporter permease | EC392_03350 | Not Available | Negative | 780510 - 781592 | 38220.0 |
| abc transporter substrate-binding protein | EC392_03355 | Not Available | Negative | 781598 - 782722 | 41747.1 |
| inositol-1-monophosphatase | EC392_03360 | Not Available | Negative | 783223 - 784026 | 29400.1 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | EC392_03365 | Not Available | Positive | 784147 - 784869 | 26774.1 |
| fe-s cluster assembly transcriptional regulator iscr | EC392_03370 | Not Available | Positive | 785000 - 785494 | 17875.1 |
| iscs subfamily cysteine desulfurase | EC392_03375 | Not Available | Positive | 785615 - 786832 | 44432.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
