Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EC392_03225 | Not Available | Positive | 743321 - 743620 | 11549.3 |
| hcp family type vi secretion system effector | EC392_03230 | Not Available | Positive | 743690 - 744208 | 19122.6 |
| type vi secretion system tip protein vgrg | EC392_03235 | Not Available | Positive | 744386 - 746239 | 68046.0 |
| duf1795 domain-containing protein | EC392_03240 | Not Available | Positive | 746254 - 746661 | 15212.0 |
| type iv secretion protein rhs | EC392_03245 | Not Available | Positive | 746673 - 750953 | 160618.0 |
| hypothetical protein | EC392_03250 | Not Available | Positive | 750963 - 751313 | 13508.2 |
| ig-like domain-containing protein | EC392_03260 | Not Available | Positive | 751606 - 756698 | 173627.0 |
| tryptophan synthase subunit beta | EC392_03265 | Not Available | Positive | 756788 - 757129 | 12825.4 |
| eal domain-containing protein | EC392_03270 | Not Available | Negative | 757184 - 759133 | 72709.5 |
| hypothetical protein | EC392_03275 | Not Available | Negative | 759143 - 759787 | 24456.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
