Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | EC392_03175 | Not Available | Negative | 730527 - 733160 | 96034.8 |
| dotu family type iv/vi secretion system protein | EC392_03180 | Not Available | Negative | 733177 - 733884 | 27296.9 |
| type vi secretion system baseplate subunit tssk | EC392_03185 | Not Available | Negative | 733973 - 735307 | 49550.0 |
| type vi secretion system lipoprotein tssj | EC392_03190 | Not Available | Negative | 735310 - 735825 | 19105.8 |
| type vi secretion system-associated fha domain protein tagh | EC392_03195 | Not Available | Negative | 735825 - 737063 | 46179.2 |
| type vi secretion system baseplate subunit tssg | EC392_03200 | Not Available | Negative | 737066 - 738064 | 37608.9 |
| type vi secretion system baseplate subunit tssf | EC392_03205 | Not Available | Negative | 738028 - 739794 | 67017.1 |
| type vi secretion system baseplate subunit tsse | EC392_03210 | Not Available | Negative | 739797 - 740231 | 16381.2 |
| type vi secretion system contractile sheath large subunit | EC392_03215 | Not Available | Negative | 740238 - 741716 | 55357.7 |
| type vi secretion system contractile sheath small subunit | EC392_03220 | Not Available | Negative | 741747 - 742250 | 18616.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
