Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine-protein kinase/phosphatase uhpb | EC392_03125 | Not Available | Negative | 715984 - 717516 | 56328.4 |
| transcriptional regulator uhpa | EC392_03130 | Not Available | Negative | 717516 - 718106 | 21576.4 |
| hnh endonuclease | EC392_03135 | Not Available | Negative | 718238 - 719005 | 28921.9 |
| duf1615 domain-containing protein | EC392_03140 | Not Available | Positive | 719166 - 720278 | 40795.1 |
| sel1 repeat family protein | EC392_03145 | Not Available | Negative | 720525 - 721901 | 50373.4 |
| hypothetical protein | EC392_03150 | Not Available | Negative | 721976 - 723391 | 53710.7 |
| type vi secretion system membrane subunit tssm | EC392_03155 | Not Available | Negative | 723435 - 726938 | 132825.0 |
| type vi secretion system protein tssa | EC392_03160 | Not Available | Negative | 726963 - 728375 | 51756.5 |
| type vi secretion system-associated protein tago | EC392_03165 | Not Available | Negative | 728393 - 728983 | 21634.6 |
| sigma-54-dependent fis family transcriptional regulator | EC392_03170 | Not Available | Negative | 728983 - 730524 | 57254.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
