Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | EC392_02390 | Not Available | Negative | 562586 - 563305 | 26087.5 |
| phosphopentomutase | EC392_02395 | Not Available | Negative | 563361 - 564584 | 43679.4 |
| thymidine phosphorylase | EC392_02400 | Not Available | Negative | 564586 - 565971 | 49921.9 |
| deoxyribose-phosphate aldolase | EC392_02405 | Not Available | Negative | 566054 - 566833 | 27969.6 |
| giy-yig nuclease family protein | EC392_02410 | Not Available | Positive | 567936 - 568241 | 11512.8 |
| n-acetyltransferase | EC392_02415 | Not Available | Negative | 568228 - 568731 | 18033.3 |
| scp2 domain-containing protein | EC392_02420 | Not Available | Negative | 568725 - 569249 | 19936.1 |
| u32 family peptidase | EC392_02425 | Not Available | Positive | 569567 - 570562 | 37039.0 |
| u32 family peptidase | EC392_02430 | Not Available | Positive | 570576 - 571454 | 33200.7 |
| luciferase-like monooxygenase | EC392_02435 | Not Available | Positive | 571589 - 572617 | 37911.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
