Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb5 | EC392_15955 | Not Available | Negative | 3544798 - 3545514 | 26582.6 |
| atpase | EC392_15960 | Not Available | Negative | 3545525 - 3548272 | 104513.0 |
| conjugal transfer protein | EC392_15965 | Not Available | Negative | 3548291 - 3548587 | 10218.6 |
| hypothetical protein | EC392_15970 | Not Available | Negative | 3548584 - 3549255 | 24934.9 |
| hypothetical protein | EC392_15975 | Not Available | Negative | 3549264 - 3549491 | 8208.75 |
| hypothetical protein | EC392_15980 | Not Available | Negative | 3549488 - 3549715 | 8625.42 |
| transcriptional antiterminator nusg | EC392_15985 | Not Available | Negative | 3549787 - 3550242 | 17205.8 |
| xre family transcriptional regulator | EC392_15990 | Not Available | Positive | 3550494 - 3550853 | 13509.3 |
| repa protein | EC392_15995 | Not Available | Positive | 3551455 - 3552033 | 22122.8 |
| gamma carbonic anhydrase family protein | EC392_16000 | Not Available | Positive | 3553589 - 3554125 | 19217.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
