Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EC392_15905 | Not Available | Negative | 3538147 - 3538497 | 13064.3 |
| hypothetical protein | EC392_15910 | Not Available | Negative | 3538475 - 3538714 | 8921.6 |
| conjugal transfer protein | EC392_15915 | Not Available | Negative | 3538716 - 3539021 | 10754.2 |
| cag pathogenicity island protein cag12 | EC392_15920 | Not Available | Negative | 3539105 - 3539506 | 14808.8 |
| p-type dna transfer atpase virb11 | EC392_15925 | Not Available | Negative | 3539493 - 3540527 | 39050.8 |
| trbi/virb10 family protein | EC392_15930 | Not Available | Negative | 3540527 - 3541735 | 43413.6 |
| p-type conjugative transfer protein virb9 | EC392_15935 | Not Available | Negative | 3541735 - 3542631 | 33425.4 |
| type iv secretion system protein | EC392_15940 | Not Available | Negative | 3542631 - 3543314 | 26242.3 |
| type iv secretion system protein | EC392_15945 | Not Available | Negative | 3543473 - 3544501 | 36419.7 |
| hypothetical protein | EC392_15950 | Not Available | Negative | 3544512 - 3544787 | 10502.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
