Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyl-amp synthase | EC392_01350 | Not Available | Negative | 316251 - 316871 | 22984.7 |
| php domain-containing protein | EC392_01355 | Not Available | Negative | 316943 - 317836 | 32811.2 |
| anthranilate synthase component 1 | EC392_01360 | Not Available | Positive | 318179 - 319741 | 57830.1 |
| anthranilate synthase component ii | EC392_01365 | Not Available | Positive | 319741 - 320319 | 20774.2 |
| anthranilate phosphoribosyltransferase | EC392_01370 | Not Available | Positive | 320339 - 321340 | 35634.4 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | EC392_01375 | Not Available | Positive | 321344 - 322732 | 50742.8 |
| tryptophan synthase subunit beta | EC392_01380 | Not Available | Positive | 322745 - 323935 | 43013.7 |
| tryptophan synthase subunit alpha | EC392_01385 | Not Available | Positive | 323935 - 324747 | 29184.1 |
| ykgj family cysteine cluster protein | EC392_01390 | Not Available | Positive | 325237 - 325611 | 13406.8 |
| upf0259 family protein | EC392_01395 | Not Available | Positive | 325724 - 326476 | 26744.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
