Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 261 - 376 | Not Available |
| purine nucleoside phosphoramidase | EC392_00010 | Not Available | Positive | 1422 - 1772 | 12704.5 |
| penicillin-binding protein activator lpob | EC392_00015 | Not Available | Positive | 1863 - 2444 | 20359.4 |
| thiamine kinase | EC392_00020 | Not Available | Positive | 2451 - 3299 | 32493.6 |
| beta-n-acetylhexosaminidase | EC392_00025 | Not Available | Positive | 3338 - 4363 | 37663.1 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3560 - 5105 | Not Available |
| nad(p)/fad-dependent oxidoreductase | EC392_00030 | Not Available | Positive | 4713 - 6020 | 47467.4 |
| glycine zipper 2tm domain-containing protein | EC392_00035 | Not Available | Positive | 6356 - 6895 | 19012.8 |
| glutamate/aspartate abc transporter substrate-binding protein | EC392_00040 | Not Available | Negative | 7017 - 7919 | 33067.6 |
| transcription-repair coupling factor | EC392_00045 | Not Available | Negative | 8368 - 11817 | 130306.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
