Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) diphosphatase | EC392_15385 | Not Available | Positive | 3438412 - 3439185 | 29414.4 |
| uroporphyrinogen decarboxylase | EC392_15390 | Not Available | Positive | 3439301 - 3440374 | 39533.9 |
| deoxyribonuclease v | EC392_15395 | Not Available | Positive | 3440371 - 3441048 | 24874.2 |
| duf416 family protein | EC392_15400 | Not Available | Positive | 3441139 - 3441729 | 22594.0 |
| dna-binding protein hu-alpha | EC392_15405 | Not Available | Positive | 3441915 - 3442187 | 9534.48 |
| duf1481 domain-containing protein | EC392_15410 | Not Available | Positive | 3442192 - 3442893 | 26109.9 |
| phosphoribosylamine--glycine ligase | EC392_15415 | Not Available | Negative | 3442960 - 3444252 | 45610.4 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EC392_15420 | Not Available | Negative | 3444271 - 3445860 | 57481.3 |
| deor/glpr transcriptional regulator | EC392_15440 | Not Available | Negative | 3448172 - 3448945 | 28503.3 |
| pts sugar transporter subunit iib | EC392_15445 | Not Available | Positive | 3449415 - 3449744 | 12082.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
