Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnfh family protein | EC392_15230 | Not Available | Negative | 3403826 - 3404116 | 11054.5 |
| type ii toxin-antitoxin system rata family toxin | EC392_15235 | Not Available | Negative | 3404109 - 3404543 | 16043.2 |
| ssra-binding protein smpb | EC392_15240 | Not Available | Positive | 3404697 - 3405179 | 18355.1 |
| Tmrna,resume consensus sequence (at 84): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 3405229 - 3405592 | Not Available |
| duf4102 domain-containing protein | EC392_15250 | Not Available | Positive | 3405757 - 3406986 | 46583.5 |
| hypothetical protein | EC392_15255 | Not Available | Positive | 3407210 - 3408400 | 45987.3 |
| hypothetical protein | EC392_15260 | Not Available | Positive | 3408397 - 3408843 | 16706.8 |
| duf3732 domain-containing protein | EC392_15265 | Not Available | Positive | 3408843 - 3410663 | 70219.9 |
| hypothetical protein | EC392_15270 | Not Available | Negative | 3410718 - 3411194 | 17851.2 |
| alpa family transcriptional regulator | EC392_15275 | Not Available | Negative | 3411562 - 3411768 | 7887.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
