Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | EC392_14915 | Not Available | Negative | 3334968 - 3335702 | 28530.7 |
| sensor histidine kinase | EC392_14920 | Not Available | Negative | 3335725 - 3337425 | 63256.6 |
| nucleoid-associated protein yejk | EC392_14925 | Not Available | Negative | 3337616 - 3338626 | 37959.7 |
| duf1414 domain-containing protein | EC392_14930 | Not Available | Positive | 3338804 - 3339031 | 8366.07 |
| duf3413 domain-containing protein | EC392_14935 | Not Available | Positive | 3339045 - 3340799 | 66001.2 |
| Trna-pro | Not Available | Not Available | Positive | 3340878 - 3340954 | Not Available |
| cold shock domain-containing protein | EC392_14945 | Not Available | Positive | 3341249 - 3341725 | 17522.0 |
| duf2058 domain-containing protein | EC392_14950 | Not Available | Positive | 3342181 - 3342720 | 20269.6 |
| cold-shock protein | EC392_14960 | Not Available | Negative | 3344209 - 3344421 | 7603.95 |
| glpm family protein | EC392_14965 | Not Available | Negative | 3345037 - 3345366 | 12083.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
