Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| utra domain-containing protein | EC392_01300 | Not Available | Positive | 301150 - 301860 | 26984.4 |
| dspfavrf family protein | EC392_01305 | Not Available | Negative | 301991 - 302419 | 15882.1 |
| avre-family type 3 secretion system effector | EC392_01310 | Not Available | Negative | 302452 - 307485 | 179125.0 |
| pectate lyase | EC392_01315 | Not Available | Positive | 307708 - 309087 | 46785.5 |
| dna-binding protein | EC392_01320 | Not Available | Positive | 309089 - 309433 | 12860.1 |
| type i dna topoisomerase | EC392_01325 | Not Available | Negative | 309603 - 312200 | 97267.8 |
| duf2498 family protein | EC392_01330 | Not Available | Positive | 312634 - 312891 | 9746.52 |
| protease sohb | EC392_01335 | Not Available | Negative | 313008 - 314054 | 38448.7 |
| ycik family oxidoreductase | EC392_01340 | Not Available | Positive | 314375 - 315136 | 27954.9 |
| 23s rrna pseudouridine(2605) synthase rlub | EC392_01345 | Not Available | Negative | 315227 - 316108 | 33352.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
