Lonsdalea populi strain L6_4B 48

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Lonsdalea

Description

Lonsdalea populi strain L6_4B 48 is a Gram-negative bacterium characterized by its rod-shaped morphology. It is mesophilic, with an optimal growth temperature of 32°C, indicating that it thrives in moderate temperature environments. This trait suggests that L6_4B 48 is well-suited for habitats that experience typical environmental temperatures, which may include various soil and plant-associated ecosystems. The genetic makeup of Lonsdalea populi strain L6_4B 48 is defined by a single replicon, which may indicate a streamlined genomic organization suited for its ecological niche. The strain is cataloged under the accession number RJUJ00000000.1, providing a reference for genomic studies and further analysis within microbiological databases. The ecological significance of Lonsdalea populi, including strain L6_4B 48, can be highlighted by its association with poplar trees, suggesting a role in the microbial community interacting with plant health and soil dynamics. The understanding of such microorganisms can contribute to insights regarding nutrient cycling and plant-microbe interactions in forest ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusLonsdalea
SpeciesLonsdalea populi
Strainstrain L6_4B 48

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lonsdalea populi strain L6_4B 48, whole genome shotgun sequence.

Gene Summary

Adenine Count

821858 bp

Thymine Count

826786 bp

Guanine Count

1028989 bp

Cytosine Count

1014783 bp

Genome Length

3696027 bp

Protein-coding Genes

3128 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein ftsxEC392_13460Not AvailableNegative3008253 - 300923336052.4
cell division atp-binding protein ftseEC392_13465Not AvailableNegative3009226 - 300989424538.9
signal recognition particle-docking protein ftsyEC392_13470Not AvailableNegative3009900 - 301142054809.6
16s rrna (guanine(966)-n(2))-methyltransferaseEC392_13475Not AvailablePositive3011722 - 301229721375.5
duf1145 family proteinEC392_13480Not AvailablePositive3012326 - 301261311088.2
duf1820 family proteinEC392_13485Not AvailableNegative3012659 - 301298512294.6
lysoplasmalogenaseEC392_13490Not AvailablePositive3013218 - 301384723505.8
sulfurtransferase tusaEC392_13495Not AvailableNegative3013885 - 30141339063.16
7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporterEC392_13500Not AvailablePositive3014326 - 301497924581.6
duf1795 domain-containing proteinEC392_13505Not AvailablePositive3015100 - 301565719661.3

Displaying genes 2611 – 2620 of 3211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.