Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | EC392_13285 | Not Available | Negative | 2967472 - 2967720 | 9458.32 |
| radical sam protein | EC392_13290 | Not Available | Negative | 2967725 - 2968894 | 45286.3 |
| amino acid adenylation domain-containing protein | EC392_13300 | Not Available | Positive | 2969908 - 2978236 | 308016.0 |
| agmatine deiminase | EC392_13310 | Not Available | Negative | 2979089 - 2980204 | 41368.0 |
| n-carbamoylputrescine amidase | EC392_13315 | Not Available | Negative | 2980208 - 2981092 | 32951.1 |
| 6-phosphofructokinase | EC392_13320 | Not Available | Negative | 2981278 - 2982240 | 34737.0 |
| cdf family cation-efflux pump fief | EC392_13325 | Not Available | Negative | 2982466 - 2983368 | 32974.0 |
| hypothetical protein | EC392_13330 | Not Available | Negative | 2983468 - 2983659 | 7411.48 |
| cpbp family intramembrane metalloprotease | EC392_13340 | Not Available | Negative | 2984199 - 2985014 | 30384.3 |
| hypothetical protein | EC392_13355 | Not Available | Negative | 2987016 - 2987165 | 5688.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
