Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EC392_13160 | Not Available | Positive | 2933880 - 2937281 | 127959.0 |
| fad-dependent oxidoreductase | EC392_13165 | Not Available | Negative | 2937559 - 2939490 | 69745.3 |
| iclr family transcriptional regulator | EC392_13170 | Not Available | Negative | 2940552 - 2941274 | 26177.6 |
| 2-hydroxyacid dehydrogenase | EC392_13175 | Not Available | Negative | 2941332 - 2942255 | 32900.6 |
| mfs transporter | EC392_13180 | Not Available | Negative | 2942284 - 2943504 | 44295.6 |
| pyridoxal phosphate-dependent aminotransferase | EC392_13185 | Not Available | Negative | 2943599 - 2944801 | 43335.9 |
| amino acid abc transporter atp-binding protein | EC392_13190 | Not Available | Negative | 2944815 - 2945540 | 26951.7 |
| amino acid abc transporter permease | EC392_13195 | Not Available | Negative | 2945542 - 2946252 | 25950.7 |
| amino acid abc transporter permease | EC392_13200 | Not Available | Negative | 2946254 - 2946952 | 25895.1 |
| amino acid abc transporter substrate-binding protein | EC392_13205 | Not Available | Negative | 2947112 - 2947981 | 31522.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
