Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3811 domain-containing protein | EC392_01095 | Not Available | Negative | 251361 - 251627 | 10315.2 |
| hamp domain-containing protein | EC392_01100 | Not Available | Positive | 251917 - 253539 | 59066.0 |
| osmc family peroxiredoxin | EC392_01105 | Not Available | Negative | 253805 - 254233 | 15086.0 |
| nadh:flavin oxidoreductase/nadh oxidase | EC392_01110 | Not Available | Positive | 254458 - 255540 | 38838.2 |
| sdr family oxidoreductase | EC392_01115 | Not Available | Positive | 255661 - 256401 | 25873.1 |
| oxalate/formate mfs antiporter | EC392_01120 | Not Available | Negative | 256476 - 257735 | 45997.2 |
| hypothetical protein | EC392_01125 | Not Available | Positive | 258309 - 259646 | 48410.3 |
| virulence factor srfb | EC392_01130 | Not Available | Positive | 259649 - 262636 | 112283.0 |
| virulence factor | EC392_01135 | Not Available | Positive | 262633 - 265131 | 93419.0 |
| hypothetical protein | EC392_01140 | Not Available | Positive | 265481 - 267031 | 57686.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
