Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | EC392_11490 | Not Available | Positive | 2582363 - 2583367 | 37562.1 |
| peptidylprolyl isomerase a | EC392_11495 | Not Available | Positive | 2583610 - 2584179 | 20318.2 |
| duf4102 domain-containing protein | EC392_11500 | Not Available | Positive | 2584523 - 2585713 | 45155.5 |
| hypothetical protein | EC392_11505 | Not Available | Negative | 2586312 - 2586749 | 16465.9 |
| ybjn domain-containing protein | EC392_11510 | Not Available | Negative | 2586771 - 2587181 | 15821.0 |
| dna-binding transcriptional regulator | EC392_11515 | Not Available | Negative | 2587391 - 2587714 | 11837.5 |
| type ii toxin-antitoxin system rele/pare family toxin | EC392_11520 | Not Available | Negative | 2587698 - 2588057 | 13643.5 |
| dna-binding protein | EC392_11530 | Not Available | Positive | 2589067 - 2589945 | 33032.9 |
| alpa family transcriptional regulator | EC392_11535 | Not Available | Positive | 2589948 - 2590148 | 7601.39 |
| hypothetical protein | EC392_11540 | Not Available | Positive | 2590145 - 2590681 | 19532.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
