Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | EC392_11090 | Not Available | Positive | 2491975 - 2493234 | 46926.9 |
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | EC392_11095 | Not Available | Positive | 2493465 - 2494559 | 40573.9 |
| eca polysaccharide chain length modulation protein | EC392_11100 | Not Available | Positive | 2494573 - 2495616 | 39133.5 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | EC392_11105 | Not Available | Positive | 2495671 - 2496801 | 41504.1 |
| udp-n-acetyl-d-mannosamine dehydrogenase | EC392_11110 | Not Available | Positive | 2496798 - 2498060 | 46128.5 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | EC392_11115 | Not Available | Positive | 2498106 - 2498810 | 26067.0 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | EC392_11120 | Not Available | Positive | 2498815 - 2499945 | 42348.9 |
| lipid iii flippase wzxe | EC392_11125 | Not Available | Positive | 2499947 - 2501197 | 45416.2 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | EC392_11130 | Not Available | Positive | 2501194 - 2502282 | 41331.9 |
| o-antigen assembly polymerase | EC392_11135 | Not Available | Positive | 2502279 - 2503658 | 52381.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
