Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | EC392_00890 | Not Available | Positive | 204060 - 205022 | 35676.4 |
| atp-dependent helicase hrpa | EC392_00895 | Not Available | Positive | 205172 - 205375 | 7033.47 |
| serine kinase | EC392_00900 | Not Available | Positive | 205461 - 205829 | 12849.1 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | EC392_00905 | Not Available | Positive | 205840 - 206616 | 28153.2 |
| hrpe/yscl family type iii secretion apparatus protein | EC392_00915 | Not Available | Positive | 207278 - 207874 | 22585.8 |
| serine kinase | EC392_00920 | Not Available | Positive | 208106 - 208333 | 7977.31 |
| serine kinase | EC392_00925 | Not Available | Positive | 208320 - 208754 | 16109.5 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | EC392_00930 | Not Available | Positive | 208747 - 210798 | 74613.5 |
| type iii secretion protein hrpt | EC392_00935 | Not Available | Positive | 210817 - 211002 | 6827.22 |
| hypothetical protein | EC392_00940 | Not Available | Positive | 210999 - 211370 | 13999.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
