Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | EC392_10670 | Not Available | Positive | 2404379 - 2405245 | 31630.1 |
| phenolic acid decarboxylase | EC392_10680 | Not Available | Negative | 2405817 - 2406335 | 19867.3 |
| lysr family transcriptional regulator | EC392_10685 | Not Available | Positive | 2406470 - 2407387 | 33710.6 |
| 4,5-dopa dioxygenase extradiol | EC392_10690 | Not Available | Positive | 2407603 - 2408385 | 28790.7 |
| sel1 repeat family protein | EC392_10695 | Not Available | Negative | 2408451 - 2409005 | 20692.5 |
| glutathionylspermidine synthase family protein | EC392_10700 | Not Available | Negative | 2409231 - 2410391 | 44631.5 |
| duf1190 family protein | EC392_10705 | Not Available | Negative | 2410404 - 2411117 | 25760.3 |
| outer membrane channel protein tolc | EC392_10710 | Not Available | Negative | 2411361 - 2412749 | 50284.8 |
| adp-ribose diphosphatase | EC392_10715 | Not Available | Positive | 2413111 - 2413743 | 23834.1 |
| duf1249 family protein | EC392_10720 | Not Available | Positive | 2413748 - 2414170 | 16819.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
