Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2e,6e)-farnesyl diphosphate synthase | EC392_10215 | Not Available | Negative | 2311939 - 2312850 | 32455.8 |
| exodeoxyribonuclease vii small subunit | EC392_10220 | Not Available | Negative | 2312858 - 2313100 | 8943.51 |
| trna 4-thiouridine(8) synthase thii | EC392_10225 | Not Available | Positive | 2313336 - 2314784 | 55028.1 |
| protein deglycase yajl | EC392_10230 | Not Available | Negative | 2314853 - 2315443 | 20801.4 |
| 2-dehydropantoate 2-reductase | EC392_10235 | Not Available | Negative | 2315406 - 2316314 | 33287.4 |
| yajq family cyclic di-gmp-binding protein | EC392_10240 | Not Available | Positive | 2316493 - 2316984 | 18305.8 |
| amino acid abc transporter atp-binding protein | EC392_10250 | Not Available | Negative | 2317756 - 2318517 | 28676.9 |
| amino acid abc transporter permease | EC392_10255 | Not Available | Negative | 2318526 - 2319614 | 40483.5 |
| amino acid abc transporter permease | EC392_10260 | Not Available | Negative | 2319630 - 2320808 | 43144.9 |
| amino acid abc transporter substrate-binding protein | EC392_10265 | Not Available | Negative | 2320874 - 2321899 | 36962.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
