Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Lonsdalea populi strain L6_4B 48
Accession NumberRJUJ00000000.1
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | + | 607706 - 607781 | Not Available |
| Putative transposase orfb | EC392_02630 | Not Available | - | 607954 - 609122 | 45154.3 |
| duf3757 domain-containing protein | EC392_02635 | Not Available | - | 609267 - 609641 | 13780.1 |
| Capsid packaging protein | EC392_02640 | Not Available | + | 610016 - 610270 | 9390.56 |
| Isxcc1 transposase | EC392_02645 | Not Available | + | 610351 - 611463 | 43432.3 |
| 5s ribosomal rna | Not Available | Not Available | + | 1 - 116 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 7 - 122 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 21 - 136 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 197 - 3133 | Not Available |
| malate/lactate/ureidoglycolate dehydrogenase | EC392_00005 | Not Available | + | 252 - 1313 | 37781.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.