Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | EC392_09915 | Not Available | Positive | 2238437 - 2239162 | 26832.1 |
| elongation factor ts | EC392_09920 | Not Available | Positive | 2239275 - 2240132 | 30735.0 |
| ump kinase | EC392_09925 | Not Available | Positive | 2240274 - 2241005 | 26169.8 |
| ribosome recycling factor | EC392_09930 | Not Available | Positive | 2241141 - 2241698 | 20728.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EC392_09935 | Not Available | Positive | 2241899 - 2243092 | 42883.7 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | EC392_09940 | Not Available | Positive | 2243282 - 2244043 | 28550.9 |
| phosphatidate cytidylyltransferase | EC392_09945 | Not Available | Positive | 2244053 - 2244910 | 31190.4 |
| sigma e protease regulator rsep | EC392_09950 | Not Available | Positive | 2244932 - 2246287 | 49627.0 |
| outer membrane protein assembly factor bama | EC392_09955 | Not Available | Positive | 2246323 - 2248749 | 89286.8 |
| molecular chaperone skp | EC392_09960 | Not Available | Positive | 2248892 - 2249389 | 18493.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
