Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2220378 - 2220454 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2220504 - 2220580 | Not Available |
| murein transglycosylase a | EC392_09825 | Not Available | Positive | 2220807 - 2221982 | 42569.6 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | EC392_09830 | Not Available | Positive | 2222159 - 2222983 | 29382.4 |
| cysteine desulfurase sulfur acceptor subunit csde | EC392_09835 | Not Available | Negative | 2222971 - 2223414 | 16168.4 |
| cysteine desulfurase csda | EC392_09840 | Not Available | Negative | 2223420 - 2224625 | 43474.1 |
| ygdi/ygdr family lipoprotein | EC392_09845 | Not Available | Positive | 2224810 - 2225031 | 8016.58 |
| transcriptional regulator gcva | EC392_09850 | Not Available | Positive | 2225379 - 2226308 | 34745.8 |
| duf423 domain-containing protein | EC392_09855 | Not Available | Positive | 2226361 - 2226756 | 14361.8 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | EC392_09860 | Not Available | Positive | 2226749 - 2227849 | 42189.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
