Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | EC392_00790 | Not Available | Positive | 184723 - 185754 | 38031.2 |
| abc transporter permease | EC392_00795 | Not Available | Positive | 185790 - 187058 | 47025.2 |
| abc transporter permease | EC392_00800 | Not Available | Positive | 187074 - 187895 | 29517.2 |
| membrane protein insertion efficiency factor yidd | EC392_00805 | Not Available | Negative | 187961 - 188185 | 8619.74 |
| duf4177 domain-containing protein | EC392_00810 | Not Available | Negative | 188188 - 188409 | 8367.91 |
| peptide antibiotic transporter sbma | EC392_00815 | Not Available | Negative | 188659 - 189891 | 46722.0 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | EC392_00820 | Not Available | Negative | 190137 - 191234 | 41608.5 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | EC392_00825 | Not Available | Negative | 191256 - 192059 | 29540.4 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | EC392_00830 | Not Available | Negative | 192067 - 192327 | 9410.29 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | EC392_00835 | Not Available | Negative | 192335 - 192988 | 23838.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
