Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetraacyldisaccharide 4'-kinase | EC392_08925 | Not Available | Positive | 2025892 - 2026902 | 36434.1 |
| hypothetical protein | EC392_08930 | Not Available | Positive | 2026951 - 2027133 | 6784.29 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | EC392_08935 | Not Available | Positive | 2027130 - 2027882 | 27771.4 |
| pectate lyase | EC392_08940 | Not Available | Positive | 2028154 - 2029467 | 46832.7 |
| hypothetical protein | EC392_08945 | Not Available | Positive | 2029626 - 2030519 | 34441.8 |
| envelope biogenesis factor elyc | EC392_08950 | Not Available | Negative | 2030516 - 2031292 | 27989.0 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | EC392_08955 | Not Available | Positive | 2031446 - 2032231 | 29424.7 |
| chromosome partition protein mukf | EC392_08960 | Not Available | Positive | 2032228 - 2033550 | 50306.3 |
| chromosome partition protein muke | EC392_08965 | Not Available | Positive | 2033531 - 2034250 | 27283.4 |
| chromosome partition protein mukb | EC392_08970 | Not Available | Positive | 2034247 - 2038689 | 169489.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
