Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EC392_08815 | Not Available | Positive | 2000263 - 2001087 | 29871.2 |
| sensor histidine kinase | EC392_08825 | Not Available | Negative | 2001812 - 2003455 | 60898.5 |
| malate permease | EC392_08830 | Not Available | Positive | 2003882 - 2005258 | 48667.7 |
| faa hydrolase family protein | EC392_08835 | Not Available | Positive | 2005314 - 2006198 | 32364.2 |
| [citrate (pro-3s)-lyase] ligase | EC392_08840 | Not Available | Positive | 2006272 - 2007315 | 39347.2 |
| citrate lyase acyl carrier protein | EC392_08845 | Not Available | Positive | 2007348 - 2007638 | 10464.7 |
| citrate (pro-3s)-lyase subunit beta | EC392_08850 | Not Available | Positive | 2007638 - 2008513 | 32023.5 |
| citrate lyase subunit alpha | EC392_08855 | Not Available | Positive | 2008550 - 2010079 | 54872.8 |
| citrate lyase holo-[acyl-carrier protein] synthase | EC392_08860 | Not Available | Positive | 2010072 - 2010614 | 19987.9 |
| triphosphoribosyl-dephospho-coa synthase citg | EC392_08865 | Not Available | Positive | 2010592 - 2011488 | 32206.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
