Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane permeability protein sana | EC392_08510 | Not Available | Negative | 1930789 - 1931535 | 27860.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | EC392_08515 | Not Available | Negative | 1931714 - 1933057 | 49926.9 |
| metal abc transporter substrate-binding protein | EC392_08525 | Not Available | Positive | 1934023 - 1934862 | 30138.4 |
| methionine abc transporter atp-binding protein | EC392_08530 | Not Available | Positive | 1934946 - 1935962 | 36608.7 |
| abc transporter permease | EC392_08535 | Not Available | Positive | 1935955 - 1936614 | 23716.7 |
| serine-type d-ala-d-ala carboxypeptidase | EC392_08540 | Not Available | Positive | 1936862 - 1938049 | 42712.3 |
| dna-binding transcriptional repressor deor | EC392_08545 | Not Available | Negative | 1937985 - 1938842 | 31065.3 |
| transporter | EC392_08550 | Not Available | Negative | 1939371 - 1941059 | 60682.4 |
| hypothetical protein | EC392_08555 | Not Available | Positive | 1941369 - 1941740 | 13648.3 |
| grxa family glutaredoxin | EC392_08560 | Not Available | Negative | 1941860 - 1942123 | 9888.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
