Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock-like protein cspe | EC392_08050 | Not Available | Negative | 1823704 - 1823913 | 7368.68 |
| arsc family reductase | EC392_08055 | Not Available | Positive | 1824466 - 1824825 | 13812.4 |
| succinyl-diaminopimelate desuccinylase | EC392_08060 | Not Available | Positive | 1824827 - 1825954 | 40999.8 |
| d-alanyl-d-alanine carboxypeptidase family protein | EC392_08065 | Not Available | Positive | 1825951 - 1826625 | 25845.7 |
| ypfn family protein | EC392_08070 | Not Available | Positive | 1826627 - 1826839 | 8466.15 |
| esterase | EC392_08075 | Not Available | Negative | 1826983 - 1827666 | 25434.5 |
| trna(met) cytidine acetyltransferase | EC392_08080 | Not Available | Negative | 1827816 - 1829825 | 74270.8 |
| duf441 domain-containing protein | EC392_08085 | Not Available | Negative | 1829854 - 1830309 | 15556.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | EC392_08090 | Not Available | Negative | 1830472 - 1831185 | 27016.5 |
| outer membrane protein assembly factor bamc | EC392_08095 | Not Available | Negative | 1831287 - 1832327 | 37886.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
