Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | EC392_08000 | Not Available | Positive | 1814012 - 1815916 | 71377.4 |
| rod shape-determining protein roda | EC392_08005 | Not Available | Positive | 1815925 - 1817037 | 40562.5 |
| endolytic peptidoglycan transglycosylase rlpa | EC392_08010 | Not Available | Positive | 1817047 - 1818075 | 36500.0 |
| serine-type d-ala-d-ala carboxypeptidase | EC392_08015 | Not Available | Positive | 1818247 - 1819458 | 44416.3 |
| duf493 family protein | EC392_08020 | Not Available | Positive | 1819577 - 1819840 | 9830.94 |
| lipoyl(octanoyl) transferase lipb | EC392_08025 | Not Available | Positive | 1819957 - 1820658 | 26224.4 |
| lipoyl synthase | EC392_08030 | Not Available | Positive | 1820832 - 1821797 | 36303.9 |
| twin-arginine translocase subunit tate | EC392_08035 | Not Available | Negative | 1821899 - 1822105 | 7225.88 |
| deaminated glutathione amidase | EC392_08040 | Not Available | Negative | 1822257 - 1823048 | 29229.7 |
| fluoride efflux transporter crcb | EC392_08045 | Not Available | Positive | 1823275 - 1823658 | 13322.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
