Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | EC392_07285 | Not Available | Positive | 1658862 - 1661969 | 111610.0 |
| efflux transporter outer membrane subunit | EC392_07290 | Not Available | Positive | 1661973 - 1663373 | 50067.7 |
| siderophore-interacting protein | EC392_07295 | Not Available | Positive | 1663464 - 1664252 | 29153.5 |
| iclr family transcriptional regulator | EC392_07300 | Not Available | Negative | 1664346 - 1665047 | 24992.4 |
| lysr family transcriptional regulator | EC392_07305 | Not Available | Negative | 1665437 - 1665772 | 12280.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EC392_07310 | Not Available | Positive | 1665850 - 1667007 | 42621.9 |
| abc transporter substrate-binding protein | EC392_07315 | Not Available | Negative | 1667070 - 1667852 | 28223.8 |
| dna-binding response regulator | EC392_07320 | Not Available | Negative | 1668705 - 1669265 | 21191.0 |
| paraquat-inducible protein a | EC392_07325 | Not Available | Positive | 1670942 - 1671571 | 23173.3 |
| paraquat-inducible protein a | EC392_07330 | Not Available | Positive | 1671564 - 1672187 | 22813.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
