Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system death-on-curing family toxin | EC392_06765 | Not Available | Negative | 1550134 - 1550541 | 15240.2 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EC392_06770 | Not Available | Negative | 1550538 - 1550759 | 8154.41 |
| yicc family protein | EC392_06775 | Not Available | Negative | 1551086 - 1551949 | 33107.8 |
| lysr family transcriptional regulator | EC392_06780 | Not Available | Negative | 1552209 - 1553117 | 33490.9 |
| membrane dipeptidase | EC392_06785 | Not Available | Negative | 1553267 - 1554343 | 39023.5 |
| abc transporter substrate-binding protein | EC392_06790 | Not Available | Positive | 1554540 - 1556123 | 58675.9 |
| abc transporter permease | EC392_06795 | Not Available | Positive | 1556123 - 1557133 | 36324.0 |
| abc transporter permease | EC392_06800 | Not Available | Positive | 1557130 - 1558032 | 32277.3 |
| abc transporter atp-binding protein | EC392_06805 | Not Available | Positive | 1558033 - 1558863 | 30293.1 |
| abc transporter atp-binding protein | EC392_06810 | Not Available | Positive | 1558860 - 1559600 | 27552.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
