Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | Positive | 111400 - 111525 | Not Available |
| glutathione transferase gsta | EC392_00485 | Not Available | Negative | 110936 - 111550 | 23225.9 |
| aconitate hydratase acna | EC392_00490 | Not Available | Positive | 111984 - 114668 | 97690.0 |
| oligopeptide abc transporter substrate-binding protein oppa | EC392_00495 | Not Available | Positive | 114783 - 116399 | 60543.6 |
| gtp cyclohydrolase ii | EC392_00500 | Not Available | Negative | 116439 - 117032 | 21628.2 |
| phosphatidylglycerophosphatase b | EC392_00505 | Not Available | Positive | 117297 - 118040 | 28036.7 |
| lapa family protein | EC392_00510 | Not Available | Positive | 118253 - 118558 | 11384.2 |
| lipopolysaccharide assembly protein lapb | EC392_00515 | Not Available | Positive | 118572 - 119741 | 44572.5 |
| orotidine-5'-phosphate decarboxylase | EC392_00520 | Not Available | Positive | 120006 - 120743 | 26435.0 |
| stress response translation initiation inhibitor ycih | EC392_00525 | Not Available | Positive | 120740 - 121069 | 11597.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
