Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | EC392_06510 | Not Available | Negative | 1487703 - 1489220 | 57482.4 |
| carbonic anhydrase family protein | EC392_06515 | Not Available | Negative | 1489306 - 1490040 | 27721.7 |
| hypothetical protein | EC392_06520 | Not Available | Positive | 1490265 - 1490873 | 23187.9 |
| sdr family nad(p)-dependent oxidoreductase | EC392_06525 | Not Available | Negative | 1491030 - 1491794 | 27419.7 |
| aspartate aminotransferase family protein | EC392_06530 | Not Available | Positive | 1492045 - 1493361 | 47007.3 |
| abc transporter atp-binding protein | EC392_06535 | Not Available | Positive | 1493620 - 1494453 | 30758.2 |
| abc transporter permease | EC392_06540 | Not Available | Positive | 1494443 - 1495324 | 31412.6 |
| abc transporter permease | EC392_06545 | Not Available | Positive | 1495321 - 1496415 | 38563.8 |
| abc transporter substrate-binding protein | EC392_06550 | Not Available | Positive | 1496474 - 1497481 | 36468.8 |
| tetr family transcriptional regulator | EC392_06555 | Not Available | Positive | 1497555 - 1498247 | 25774.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
