Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator rbsr | EC392_05940 | Not Available | Negative | 1370434 - 1371438 | 36800.3 |
| ribokinase | EC392_05945 | Not Available | Negative | 1371451 - 1372377 | 32495.8 |
| ribose abc transporter substrate-binding protein rbsb | EC392_05950 | Not Available | Negative | 1372432 - 1373322 | 30751.1 |
| ribose abc transporter permease | EC392_05955 | Not Available | Negative | 1373349 - 1374317 | 33218.6 |
| ribose abc transporter atp-binding protein rbsa | EC392_05960 | Not Available | Negative | 1374325 - 1375833 | 54904.9 |
| d-ribose pyranase | EC392_05965 | Not Available | Negative | 1375841 - 1376260 | 15169.3 |
| ygiw/ydei family stress tolerance ob fold protein | EC392_05970 | Not Available | Negative | 1376475 - 1376870 | 14139.5 |
| response regulator | EC392_05975 | Not Available | Positive | 1377088 - 1377750 | 24628.9 |
| two-component system sensor histidine kinase qsec | EC392_05980 | Not Available | Positive | 1377747 - 1379153 | 52222.0 |
| low affinity potassium transporter kup | EC392_05985 | Not Available | Negative | 1379113 - 1380981 | 69138.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
