Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EC392_05625 | Not Available | Negative | 1293736 - 1294872 | 40571.6 |
| dna polymerase ii | EC392_05630 | Not Available | Positive | 1295295 - 1297670 | 90722.3 |
| rna polymerase-associated protein rapa | EC392_05635 | Not Available | Positive | 1298086 - 1300992 | 109459.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | EC392_05640 | Not Available | Positive | 1301061 - 1301714 | 24899.0 |
| co-chaperone djla | EC392_05645 | Not Available | Negative | 1301775 - 1302662 | 33150.0 |
| lps assembly protein lptd | EC392_05650 | Not Available | Positive | 1302849 - 1305206 | 89096.6 |
| peptidylprolyl isomerase sura | EC392_05655 | Not Available | Positive | 1305307 - 1306602 | 47565.8 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EC392_05660 | Not Available | Positive | 1306602 - 1307603 | 35739.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | EC392_05665 | Not Available | Positive | 1307596 - 1308414 | 30682.9 |
| co2+/mg2+ efflux protein apag | EC392_05670 | Not Available | Positive | 1308430 - 1308807 | 14152.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
