Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yitt family protein | EC392_05260 | Not Available | Positive | 1207740 - 1208354 | 22495.4 |
| aspartate/tyrosine/aromatic aminotransferase | EC392_05265 | Not Available | Positive | 1208417 - 1209610 | 43777.1 |
| hamp domain-containing protein | EC392_05270 | Not Available | Negative | 1209717 - 1211408 | 60415.2 |
| ggdef domain-containing protein | EC392_05275 | Not Available | Positive | 1212475 - 1214064 | 58753.4 |
| yjbq family protein | EC392_05280 | Not Available | Negative | 1214087 - 1214506 | 15694.9 |
| excinuclease abc subunit uvra | EC392_05285 | Not Available | Negative | 1214589 - 1217420 | 104124.0 |
| single-stranded dna-binding protein ssb1 | EC392_05290 | Not Available | Positive | 1217655 - 1218197 | 19255.4 |
| glycoside hydrolase | EC392_05300 | Not Available | Positive | 1219562 - 1220323 | 28098.8 |
| mannitol dehydrogenase family protein | EC392_05305 | Not Available | Positive | 1220517 - 1221926 | 52515.5 |
| hypothetical protein | EC392_05310 | Not Available | Positive | 1221928 - 1222344 | 15141.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
