Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease r | EC392_05100 | Not Available | Negative | 1173320 - 1175773 | 92342.2 |
| hamp domain-containing protein | EC392_05110 | Not Available | Positive | 1176723 - 1178303 | 57234.5 |
| pucr family transcriptional regulator | EC392_05120 | Not Available | Positive | 1179009 - 1180232 | 45570.7 |
| cytosine deaminase | EC392_05125 | Not Available | Positive | 1180229 - 1181464 | 45721.9 |
| hypothetical protein | EC392_05130 | Not Available | Negative | 1181518 - 1181934 | 15070.9 |
| yggs family pyridoxal phosphate-dependent enzyme | EC392_05135 | Not Available | Positive | 1182179 - 1182910 | 26610.1 |
| pyrroline-5-carboxylate reductase | EC392_05140 | Not Available | Positive | 1182945 - 1183766 | 28717.5 |
| yggt family protein | EC392_05145 | Not Available | Positive | 1183824 - 1184378 | 20764.8 |
| yggu family protein | EC392_05150 | Not Available | Positive | 1184375 - 1184680 | 11111.5 |
| xtp/ditp diphosphatase | EC392_05155 | Not Available | Positive | 1184688 - 1185281 | 20923.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
