Halostreptopolyspora alba strain YIM 96095

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Nocardiopsidaceae

Genus

Halostreptopolyspora

Description

Halostreptopolyspora alba strain YIM 96095 is a unique microbial strain characterized by its possession of a single replicon. This trait suggests a streamlined genetic architecture, which can influence its metabolic pathways and adaptability to various environments. The strain is documented under the accession number RJMB00000000.1, indicating its distinct classification within scientific databases. As a member of the genus Halostreptopolyspora, this strain is likely to exhibit adaptations to saline or extreme environments, which the genus is known for. Such extremophilic characteristics may include specialized mechanisms for osmoregulation and unique metabolic processes that allow it to thrive under challenging conditions. The ecological insight provided by the existence of Halostreptopolyspora alba strain YIM 96095 highlights the diversity of microbial life in extreme environments. Its single replicon structure may confer advantages in the efficient regulation of its genetic material, which is crucial for survival in fluctuating conditions. The ability of such microbes to adapt and function in extreme habitats underscores their potential roles in biogeochemical cycles and their significance in biotechnology applications, especially in environments where other organisms may struggle to survive.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyNocardiopsidaceae
GenusHalostreptopolyspora
SpeciesHalostreptopolyspora alba
Strainstrain YIM 96095

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halostreptopolyspora alba strain YIM 96095 Scaffold98, whole

Gene Summary

Adenine Count

792774 bp

Thymine Count

798627 bp

Guanine Count

1846196 bp

Cytosine Count

1829222 bp

Genome Length

5271968 bp

Protein-coding Genes

4542 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorEFW17_01235Not AvailableNegative273415 - 27439535603.5
mfs transporterEFW17_01240Not AvailableNegative274427 - 27575547091.6
duf3237 domain-containing proteinEFW17_01245Not AvailablePositive275883 - 27635317100.5
duf1772 domain-containing proteinEFW17_01250Not AvailableNegative276410 - 27691617683.5
nitroreductase family deazaflavin-dependent oxidoreductaseEFW17_01255Not AvailablePositive277361 - 27820030406.7
aspartate/glutamate racemase family proteinEFW17_01260Not AvailablePositive278256 - 27894825307.2
padr family transcriptional regulatorEFW17_01265Not AvailableNegative279047 - 27979326221.8
nacht domain-containing proteinEFW17_01270Not AvailableNegative280381 - 283500115360.0
sam-dependent methyltransferaseEFW17_01275Not AvailableNegative283936 - 28478131323.3
hypothetical proteinEFW17_01280Not AvailablePositive284926 - 28538116860.6

Displaying genes 271 – 280 of 4608 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

315 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 315 metabolites

Health Effects

No health effects information available for this bacterium.