Staphylococcus pasteuri strain RIT605 28

Coccianaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus pasteuri strain RIT605 28 is a cocci-shaped bacterium primarily found in the endosphere of Corchorus olitorius, as well as in pork meat. This strain exhibits anaerobic growth, indicating its metabolic adaptation to environments with limited oxygen availability. Notably, strain RIT605 28 possesses true flagella, which may aid in its movement within its ecological niches. The strain is associated with two distinct hosts: the domestic chicken (Gallus gallus) and the plant Corchorus olitorius. This dual-host association highlights its ecological versatility and potential roles in both plant and animal microbiomes. The presence of only one replicon suggests a streamlined genomic organization, which may be relevant to its adaptability in various environments. The accession number for this strain is RJLY00000000.1, providing a reference for further genetic and functional studies. Understanding the ecological roles of Staphylococcus pasteuri, especially its interactions within the endosphere of plants and its presence in animal hosts, could offer insights into its potential applications in biocontrol or as a probiotic in livestock and agricultural practices. The unique habitat and anaerobic characteristics of strain RIT605 28 suggest it may play a specific role in nutrient cycling or plant health, warranting further investigation into its biological impact and applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus pasteuri
Strainstrain RIT605 28

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Staphylococcus pasteuri strain RIT605 28
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatendosphere of Corchorus olitorius; pork meat
Biotic relationshipNot Available
Host(s)Gallus gallus, Corchorus olitorius
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus pasteuri strain RIT605 28, whole genome shotgun

Gene Summary

Adenine Count

886116 bp

Thymine Count

859197 bp

Guanine Count

412114 bp

Cytosine Count

389355 bp

Genome Length

2548691 bp

Protein-coding Genes

2326 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3'-5' exoribonuclease yhamEFY78_07225Not AvailablePositive1512293 - 151323435607.9
type i toxin-antitoxin system fst family toxinEFY78_07230Not AvailablePositive1513425 - 15135203656.56
peptidylprolyl isomeraseEFY78_07235Not AvailableNegative1513680 - 151467236888.9
duf3267 domain-containing proteinEFY78_07240Not AvailableNegative1514855 - 151541222250.1
ytxh domain-containing proteinEFY78_07245Not AvailableNegative1515607 - 151597813594.9
hit family proteinEFY78_07250Not AvailableNegative1516056 - 151648116085.9
abc transporter atp-binding proteinEFY78_07255Not AvailablePositive1516613 - 151735327638.7
abc transporter permeaseEFY78_07260Not AvailablePositive1517346 - 151856948136.0
signal transduction protein trapEFY78_07265Not AvailableNegative1518625 - 151912819493.4
uroporphyrinogen decarboxylaseEFY78_07270Not AvailablePositive1519467 - 152050439022.1

Displaying genes 1431 – 1440 of 2450 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.