Flexivirga caeni strain BO-16

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermacoccaceae

Genus

Flexivirga

Description

Flexivirga caeni strain BO-16 is a notable bacterial strain characterized by its single replicon structure, which is significant for its genetic organization and stability. The strain is cataloged under the accession number RJJQ00000000.1, providing a point of reference for researchers interested in its genomic characteristics. As a member of the Flexivirga genus, this strain is likely to exhibit traits associated with its classification, including specific metabolic capabilities and ecological roles. While the precise biochemical pathways and ecological interactions of Flexivirga caeni strain BO-16 are not detailed in the available data, the presence of a single replicon suggests a streamlined genomic architecture that may confer certain advantages in its natural habitat, such as efficient replication and adaptability to environmental changes. Understanding the genetic framework of Flexivirga caeni strain BO-16 can provide insights into its ecological niche, particularly in environments where single-replicon organisms thrive. This may include specific biogeochemical cycles or interactions with other microbial communities, although specific ecological roles require further investigation. The study of such strains contributes to a broader understanding of microbial diversity and function in various ecosystems, highlighting the importance of genomic organization in microbial adaptability and survival.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermacoccaceae
GenusFlexivirga
SpeciesFlexivirga caeni
Strainstrain BO-16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flexivirga caeni strain BO-16 contig_52, whole genome shotgun

Gene Summary

Adenine Count

662915 bp

Thymine Count

664202 bp

Guanine Count

1411115 bp

Cytosine Count

1407303 bp

Genome Length

4149148 bp

Protein-coding Genes

3845 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseEFY87_12215Not AvailablePositive2512503 - 251389749908.6
upf0182 family proteinEFY87_12220Not AvailableNegative2513955 - 251670298491.1
abc transporter permeaseEFY87_12225Not AvailablePositive2517001 - 251784631513.5
abc transporter atp-binding proteinEFY87_12230Not AvailablePositive2517830 - 251869630564.7
hypothetical proteinEFY87_12235Not AvailableNegative2518697 - 251922118260.7
php domain-containing proteinEFY87_12240Not AvailablePositive2519305 - 252015330028.3
luxr family transcriptional regulatorEFY87_12245Not AvailableNegative2520367 - 252095421575.4
dead/deah box helicaseEFY87_12250Not AvailableNegative2521374 - 252285252464.2
hypothetical proteinEFY87_12255Not AvailablePositive2523122 - 252384125857.5
glsb/yeaq/ymge family stress response membrane proteinEFY87_12260Not AvailableNegative2523880 - 25241378753.29

Displaying genes 2401 – 2410 of 3898 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.