Rufibacter immobilis strain MCC P1

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Rufibacter

Description

Rufibacter immobilis strain MCC P1 is characterized by having a single replicon, which is indicative of its genomic structure. This strain has been assigned the accession number RJJE00000000.1, providing a reference for its genomic sequence in biological databases. The presence of a single replicon may suggest a streamlined genetic organization, which can be advantageous for certain ecological niches where efficiency in resource utilization is critical. This trait can play a significant role in the adaptability of the organism in various environments, potentially affecting its survival and competitive abilities. Overall, the genomic characteristics of Rufibacter immobilis strain MCC P1 highlight its potential significance in microbial ecology, particularly in environments where single replicon organisms may thrive due to their efficient metabolic pathways. Further research on this strain could provide insights into its ecological roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusRufibacter
SpeciesRufibacter immobilis
Strainstrain MCC P1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rufibacter immobilis strain MCC P1

Gene Summary

Adenine Count

1166278 bp

Thymine Count

1159045 bp

Guanine Count

1208711 bp

Cytosine Count

1238098 bp

Genome Length

4773115 bp

Protein-coding Genes

3939 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphopyruvate hydrataseEFA69_01155Not AvailableNegative288596 - 28987345993.5
carbamoyl-phosphate synthase small subunitEFA69_01160Not AvailableNegative289894 - 29100640684.3
50s ribosomal protein l17EFA69_01165Not AvailableNegative291086 - 29160418585.2
dna-directed rna polymerase subunit alphaEFA69_01170Not AvailableNegative291672 - 29266137105.6
30s ribosomal protein s4EFA69_01175Not AvailableNegative292700 - 29330522712.6
30s ribosomal protein s11EFA69_01180Not AvailableNegative293326 - 29371814028.2
30s ribosomal protein s13EFA69_01185Not AvailableNegative293729 - 29410614102.3
50s ribosomal protein l36EFA69_01190Not AvailableNegative294117 - 2942334562.78
translation initiation factor if-1EFA69_01195Not AvailableNegative294238 - 2944568294.22
type i methionyl aminopeptidaseEFA69_01200Not AvailableNegative294465 - 29522927866.2

Displaying genes 231 – 240 of 3988 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.