Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter immobilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rufibacter immobilis strain MCC P1
Accession NumberRJJE00000000.1
Gene Summary
Adenine Count
1166278 bp
Thymine Count
1159045 bp
Guanine Count
1208711 bp
Cytosine Count
1238098 bp
Genome Length
4773115 bp
Protein-coding Genes
3939 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ld-carboxypeptidase | EFA69_02315 | Not Available | + | 547456 - 548352 | 32351.1 |
| m28 family peptidase | EFA69_02320 | Not Available | - | 548476 - 549465 | 35811.1 |
| cysteine--trna ligase | EFA69_02325 | Not Available | - | 549455 - 550945 | 56250.1 |
| hypothetical protein | EFA69_02330 | Not Available | + | 551344 - 551568 | 7501.76 |
| endonuclease/exonuclease/phosphatase | EFA69_02335 | Not Available | - | 551691 - 552746 | 40438.8 |
| twin-arginine translocase tata/tate family subunit | EFA69_02340 | Not Available | + | 553017 - 553394 | 13634.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | EFA69_02345 | Not Available | + | 553398 - 554834 | 51859.5 |
| lysm peptidoglycan-binding domain-containing protein | EFA69_02350 | Not Available | + | 554834 - 556381 | 57872.2 |
| nadp-dependent malic enzyme | EFA69_02355 | Not Available | + | 556593 - 558857 | 82901.6 |
| holliday junction branch migration protein ruva | EFA69_02360 | Not Available | + | 559010 - 559600 | 21446.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.