Rufibacter immobilis strain MCC P1

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Rufibacter

Description

Rufibacter immobilis strain MCC P1 is characterized by having a single replicon, which is indicative of its genomic structure. This strain has been assigned the accession number RJJE00000000.1, providing a reference for its genomic sequence in biological databases. The presence of a single replicon may suggest a streamlined genetic organization, which can be advantageous for certain ecological niches where efficiency in resource utilization is critical. This trait can play a significant role in the adaptability of the organism in various environments, potentially affecting its survival and competitive abilities. Overall, the genomic characteristics of Rufibacter immobilis strain MCC P1 highlight its potential significance in microbial ecology, particularly in environments where single replicon organisms may thrive due to their efficient metabolic pathways. Further research on this strain could provide insights into its ecological roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusRufibacter
SpeciesRufibacter immobilis
Strainstrain MCC P1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rufibacter immobilis strain MCC P1

Gene Summary

Adenine Count

1166278 bp

Thymine Count

1159045 bp

Guanine Count

1208711 bp

Cytosine Count

1238098 bp

Genome Length

4773115 bp

Protein-coding Genes

3939 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2807 domain-containing proteinEFA69_15055Not AvailableNegative3605480 - 360637932349.7
duf4974 domain-containing proteinEFA69_15060Not AvailableNegative3606250 - 360731138563.1
rna polymerase sigma-70 factorEFA69_15065Not AvailableNegative3607383 - 360804225158.7
mfs transporterEFA69_15070Not AvailablePositive3608142 - 360946148528.7
amidohydrolaseEFA69_15075Not AvailableNegative3609552 - 361120461118.8
amp nucleosidaseEFA69_15080Not AvailableNegative3611197 - 361196728604.7
type i restriction enzyme hsdr n-terminal domain-containing proteinEFA69_15085Not AvailablePositive3612044 - 361249917252.9
alanine dehydrogenaseEFA69_15090Not AvailableNegative3612614 - 361372939804.7
duf1573 domain-containing proteinEFA69_15095Not AvailableNegative3614159 - 361495327896.7
transketolaseEFA69_15100Not AvailablePositive3615141 - 361755289757.3

Displaying genes 2991 – 3000 of 3988 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.