Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Rufibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Rufibacter |
| Species | Rufibacter latericius |
| Strain | strain R-22-1 c-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407807 bp
Thymine Count
1414610 bp
Guanine Count
1408023 bp
Cytosine Count
1440738 bp
Genome Length
5672702 bp
Protein-coding Genes
4570 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EFB08_22810 | Not Available | Positive | 5565811 - 5568837 | 108704.0 |
| ragb/susd family nutrient uptake outer membrane protein | EFB08_22815 | Not Available | Positive | 5568868 - 5570379 | 56567.5 |
| rhamnogalacturonan acetylesterase | EFB08_22820 | Not Available | Positive | 5570457 - 5571266 | 30714.2 |
| hypothetical protein | EFB08_22825 | Not Available | Positive | 5571452 - 5574460 | 111194.0 |
| tonb-dependent receptor | EFB08_22830 | Not Available | Positive | 5575438 - 5578425 | 109471.0 |
| ragb/susd family nutrient uptake outer membrane protein | EFB08_22835 | Not Available | Positive | 5578443 - 5580134 | 63282.4 |
| hypothetical protein | EFB08_22840 | Not Available | Positive | 5580231 - 5580431 | 7869.04 |
| hypothetical protein | EFB08_22845 | Not Available | Positive | 5580524 - 5583277 | 103435.0 |
| cyclic nucleotide-binding domain-containing protein | EFB08_22850 | Not Available | Positive | 5583286 - 5583738 | 16991.7 |
| hd domain-containing protein | EFB08_22855 | Not Available | Negative | 5583704 - 5584315 | 23575.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
